STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTDSP2CTD small phosphatase 2. (292 aa)    
Predicted Functional Partners:
GTF2F1
General transcription factor IIF subunit 1.
   
 0.792
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 0.686
POLR2D
DNA-directed RNA polymerase II subunit RPB4.
    
 0.648
TIMM21
Mitochondrial import inner membrane translocase subunit TIM21.
    
 0.646
LOC110080722
Mitochondrial import inner membrane translocase subunit TIM23.
    
 0.619
ENSPVIP00000016755
annotation not available
    
 0.619
CNEP1R1
Nuclear envelope phosphatase-regulatory subunit 1.
    
 0.610
SUPT5H
Transcription elongation factor SPT5.
    
 0.609
LOC110085145
DNA-directed RNA polymerase II subunit RPB11-a.
    
 0.597
POLR2C
DNA-directed RNA polymerase II subunit RPB3.
    
 0.576
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.