STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070886Vacuolar protein sorting-associated protein 29-like. (193 aa)    
Predicted Functional Partners:
VPS35
Vacuolar protein sorting-associated protein 35.
   
 0.981
TBC1D5
TBC1 domain family member 5 isoform X1.
    
 0.967
VPS26A
Vacuolar protein sorting-associated protein 26A.
   
 0.952
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 0.949
SNX2
Sorting nexin-2 isoform X1.
   
 0.948
SNX1
Sorting nexin-1/2.
   
 0.947
ANKFY1
Rabankyrin-5.
    
 0.929
VPS26C
Down syndrome critical region protein 3 isoform X1.
   
 0.905
VPS29
Vacuolar protein sorting-associated protein 29 isoform X1.
  
  
 
0.900
VPS35L
UPF0505 protein C16orf62 homolog.
    
 0.876
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.