Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XRCC3DNA repair protein XRCC3. (353 aa)    
Predicted Functional Partners:
RAD51C
DNA repair protein RAD51 homolog 3.
   
 0.997
RAD51
DNA repair protein RAD51 homolog 1.
    
 0.993
BRCA2
Breast cancer type 2 susceptibility protein.
   
 0.992
XRCC2
DNA repair protein XRCC2.
   
 0.989
WRN
Werner syndrome ATP-dependent helicase isoform X1.
  
 0.968
RAD52
DNA repair protein RAD52 homolog isoform X1.
    
 0.955
RAD51D
DNA repair protein RAD51 homolog 4 isoform X1.
    
 0.954
RAD51B
DNA repair protein RAD51 homolog 2.
    
 0.947
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.942
BLM
Bloom syndrome protein-like.
  
 0.935
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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