Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OXR1Oxidation resistance protein 1 isoform X1. (871 aa)    
Predicted Functional Partners:
ATP6V1G1
V-type H+-transporting ATPase subunit G.
    
 
 0.750
ATP6V1E1
V-type H+-transporting ATPase subunit E.
    
 
 0.623
ATXN3
Ataxin-3 isoform X1.
      
 0.617
ATP6V1D
V-type H+-transporting ATPase subunit D.
    
 
 0.594
FOS
Proto-oncogene protein c-fos.
      
 0.576
ATP6V1B2
V-type proton ATPase subunit B, brain isoform.
    
 
 0.566
HCRT
Hypocretin (orexin) neuropeptide.
      
 0.566
ATP6V1B1
V-type proton ATPase subunit B, kidney isoform.
    
 
 0.566
HCRTR2
Orexin receptor type 2 isoform X1.
      
 0.565
CPS1
Carbamoyl-phosphate synthase [ammonia], mitochondrial.
     
  0.555
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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