STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HENMT1Small RNA 2'-O-methyltransferase isoform X1. (386 aa)    
Predicted Functional Partners:
DICER1
Endoribonuclease Dicer.
   
 
 0.639
PLD6
Mitochondrial cardiolipin hydrolase.
      
 0.631
TDRD9
Tudor domain containing 9.
     
 0.615
ICE2
Little elongation complex subunit 2.
    
 0.611
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 isoform X1.
     
 0.609
TDRKH
Tudor and KH domain-containing protein isoform X1.
     
 0.601
HELZ2
Helicase with zinc finger domain 2 isoform X1.
     
 0.574
FKBP6
Inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1.
      
 0.570
ZGLP1
GATA-type zinc finger protein 1 isoform X1.
      
 0.517
PNLDC1
Poly(A)-specific ribonuclease PNLDC1 isoform X1.
      
 0.512
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.