STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNV1Potassium voltage-gated channel subfamily V member 1. (506 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.896
KCNAB3
Potassium voltage-gated channel Shaker-related subfamily A, beta member 3.
   
 0.715
RPL23A
Large subunit ribosomal protein L23Ae.
   
 0.702
RPL29
Ribosomal protein L29.
   
 0.699
ENSPVIP00000028682
annotation not available
   
 0.698
RPL35A
Large subunit ribosomal protein L35Ae.
   
 0.695
RPL30
Large subunit ribosomal protein L30e.
   
 0.693
RPL32
Ribosomal protein L32.
   
 0.687
RPL38
Large subunit ribosomal protein L38e.
   
 0.676
RPL34
Large subunit ribosomal protein L34e.
  
 0.675
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.