STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKNAD1Protein AKNAD1 isoform X1. (962 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.994
RPL39
Large subunit ribosomal protein L39e.
   
 0.980
RPL19
Large subunit ribosomal protein L19e.
   
 0.979
RPL26
Large subunit ribosomal protein L26e.
   
 0.978
RPL34
Large subunit ribosomal protein L34e.
  
 0.978
RPL29
Ribosomal protein L29.
   
 0.978
RPL14
Large subunit ribosomal protein L14e.
  
 0.977
RPL30
Large subunit ribosomal protein L30e.
   
 0.976
RPL8
Large subunit ribosomal protein L8e.
   
 0.976
RPL11
60S ribosomal protein L11 isoform X1.
   
 0.976
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.