STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRCReceptor-type tyrosine-protein phosphatase C isoform X1. (1273 aa)    
Predicted Functional Partners:
SEMA4D
Semaphorin-4D-like.
    
 0.920
HCK
Tyrosine-protein kinase HCK.
   
 0.809
LCK
Lymphocyte cell-specific protein tyrosine kinase.
   
 0.809
SPN
Leukosialin.
   
 
 0.775
CD3E
T-cell surface glycoprotein CD3 epsilon chain isoform X1.
   
 0.767
ENSPVIP00000004351
annotation not available
   
 0.750
LOC110079201
T-cell surface glycoprotein CD3 gamma chain-like isoform X1.
   
 0.720
KIT
Proto-oncogene tyrosine-protein kinase Kit.
   
 0.712
LOC110084638
T-cell surface glycoprotein CD4-like isoform X1.
   
 0.708
PTPRCAP
Protein tyrosine phosphatase receptor type C-associated protein.
   
 
 0.703
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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