STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROBO3Roundabout guidance receptor 3. (1283 aa)    
Predicted Functional Partners:
LOC110070505
Roundabout homolog 2-like.
 
     
0.884
ENSPVIP00000019109
annotation not available
 
     
0.880
ENSPVIP00000011117
Roundabout homolog 1-like.
 
     
0.856
SLIT2
Slit homolog 2 protein.
   
 0.738
SLIT1
Slit homolog 1 protein.
   
 0.681
SLIT3
Slit homolog 3 protein isoform X1.
   
 0.641
ENSPVIP00000029417
annotation not available
   
 0.641
NYX
Nyctalopin.
   
 0.630
LRIT3
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.476
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 0.461
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.