Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RD3LProtein RD3-like. (197 aa)    
Predicted Functional Partners:
GPR139
Probable G-protein coupled receptor 139.
      
 0.761
MAP6D1
MAP6 domain containing 1.
      
 0.735
BHLHA9
Basic helix-loop-helix family member a9.
      
 0.694
RFXAP
Regulatory factor X associated protein.
      
 0.693
SIK1
Serine/threonine-protein kinase SIK1 isoform X1.
      
 0.624
RRH
Visual pigment-like receptor peropsin.
      
 0.621
ENSPVIP00000030580
Opsin-5-like isoform X1.
      
 0.621
TMEM121
Transmembrane protein 121.
      
 0.614
TSPAN10
Tetraspanin-10.
      
 0.545
PRSS56
Serine protease 56.
      
 0.529
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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