Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX9LIM/homeobox protein Lhx9 isoform X1. (404 aa)    
Predicted Functional Partners:
LDB1
LIM domain-binding protein 1 isoform X1.
    
 0.750
LDB2
LIM domain-binding protein 2 isoform X1.
    
 0.750
LFNG
Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe.
    
 
 0.631
RFNG
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.631
MFNG
Beta-1,3-N-acetylglucosaminyltransferase manic fringe.
    
 
 0.631
LMO1
Rhombotin-1 isoform X1.
   
 
 0.628
LMO3
LIM domain only protein 3 isoform X1.
   
 
 0.628
KHK
Ketohexokinase isoform X1.
    
   0.616
SLC39A7
Solute carrier family 39 member 7.
      
 0.598
DLX3
Homeobox protein DLX-3.
     
 0.571
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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