STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND1BDENN domain containing 1B. (255 aa)    
Predicted Functional Partners:
DENND1B-2
DENN domain-containing protein 1B.
 
      0.892
RAB35
Ras-related protein Rab-35 isoform X1.
    
 0.840
LOC110081831
Ras-related protein Rab-35-like.
    
 0.753
YWHAE
14-3-3 protein epsilon isoform X1.
     
  0.688
DENND1A
DENN domain-containing protein 1A isoform X1.
     
 0.610
RAB21
Ras-related protein Rab-21.
      
 0.604
RAB28
Ras-related protein Rab-28 isoform X1.
     
 0.570
RAB22A
Ras-related protein Rab-22A.
      
 0.563
IFT27
Intraflagellar transport protein 27 homolog.
    
 0.490
LOC110088619
Alpha-1-antitrypsin-like.
    
   0.468
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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