Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ALMS1Alstrom syndrome protein 1 isoform X1. (2877 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK1.
    
  0.938
ENSPVIP00000032589
annotation not available
   
 0.796
QRICH2
Glutamine rich 2.
    
 0.734
CEP192
Centrosomal protein of 192 kDa.
   
 0.706
CEP164
Centrosomal protein of 164 kDa.
     
 0.689
PLK4
Serine/threonine-protein kinase PLK4 isoform X1.
    
 0.678
CEP250
Centrosome-associated protein CEP250 isoform X1.
  
 0.661
BORA
Protein aurora borealis isoform X1.
     
  0.659
UNC79
Protein unc-79 homolog isoform X1.
    
 0.652
XPNPEP3
Probable Xaa-Pro aminopeptidase 3 isoform X1.
      
 0.639
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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