STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU1WD40 repeat-containing protein SMU1. (513 aa)    
Predicted Functional Partners:
IK
IK cytokine.
   
 0.999
MFAP1
Microfibril associated protein 1.
   
 0.993
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
  0.980
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.977
ZMAT2
Zinc finger matrin-type protein 2 isoform X1.
    
 0.977
PRPF38A
Pre-mRNA-splicing factor 38A.
   
 0.974
SF3A2
Splicing factor 3A subunit 2.
    
 0.973
SF3B3
Splicing factor 3B subunit 3.
   
 0.973
LSM4
U6 snRNA-associated Sm-like protein LSm4.
    
 0.971
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.969
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.