Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMU1WD40 repeat-containing protein SMU1. (513 aa)    
Predicted Functional Partners:
IK
IK cytokine.
   
 0.992
MFAP1
Microfibril associated protein 1.
   
 0.986
ZMAT2
Zinc finger matrin-type protein 2 isoform X1.
    
 0.956
WBP4
WW domain-binding protein 4.
    
 0.924
PRPF6
pre-mRNA processing factor 6.
   
 0.922
TXNL4A
Thioredoxin-like protein 4A isoform X1.
    
 0.906
WBP11
WW domain-binding protein 11.
    
 0.905
UBL5
Ubiquitin like 5.
    
 0.898
CDC40
Pre-mRNA-processing factor 17.
   
  0.894
CD2BP2
CD2 antigen cytoplasmic tail-binding protein 2 isoform X1.
    
   0.876
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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