Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNUPNSnurportin-1. (368 aa)    
Predicted Functional Partners:
XPO1
Exportin-1.
    
 
 0.970
SNRPE
Small nuclear ribonucleoprotein E.
    
 0.970
TOE1
Target of EGR1 protein 1.
    
 
 0.933
RAN
GTP-binding nuclear protein Ran.
    
 
 0.912
SNRPA1
U2 small nuclear ribonucleoprotein A.
    
   0.895
KPNB1
Importin subunit beta-1.
    
 
 0.872
SNRPF
Small nuclear ribonucleoprotein F.
    
  0.870
SNRPD1
Small nuclear ribonucleoprotein Sm D1.
    
 0.848
SNRPB
Small nuclear ribonucleoprotein-associated protein B-like.
    
 0.826
DDX20
Probable ATP-dependent RNA helicase DDX20.
    
 0.821
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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