Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DBR1Lariat debranching enzyme isoform X1. (533 aa)    
Predicted Functional Partners:
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
    
 
 0.945
CWF19L1
CWF19-like protein 1.
   
 
 0.891
POLR3H
DNA-directed RNA polymerase III subunit RPC8.
      
 0.695
ENSPVIP00000000487
annotation not available
      
 0.693
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
      
 0.620
TARDBP
TAR DNA-binding protein 43 isoform X1.
   
  
 0.614
SMDT1
Essential MCU regulator, mitochondrial.
      
 0.573
AFG3L2
AFG3-like protein 2 isoform X1.
      
 0.571
XPO5
Exportin-5 isoform X1.
      
 0.565
MTREX
Superkiller viralicidic activity 2-like 2.
    
   0.560
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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