STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXOSC7Exosome complex component RRP42. (290 aa)    
Predicted Functional Partners:
EXOSC9
Exosome complex component RRP45 isoform X1.
   
0.999
EXOSC1
Exosome complex component CSL4.
   
 0.999
EXOSC3
Exosome complex component RRP40.
  
 0.999
EXOSC2
Exosome complex component RRP4.
   
 0.999
DIS3
Exosome complex exonuclease DIS3/RRP44.
   
 0.999
EXOSC10
Exosome component 10.
   
 0.999
ENSPVIP00000029685
annotation not available
  
 0.999
EXOSC5
Exosome complex component RRP46.
  
 0.999
MTREX
Superkiller viralicidic activity 2-like 2.
   
 0.997
C1D
Nuclear nucleic acid-binding protein C1D.
   
 0.996
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.