Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTNNB1Catenin beta-1 isoform X1. (781 aa)    
Predicted Functional Partners:
APC
Adenomatous polyposis coli protein isoform X1.
   
 0.999
CDH5
Cadherin 5, type 2, VE-cadherin.
    
 0.999
LEF1
Lymphoid enhancer binding factor 1.
    
 0.999
CSNK1A1
Casein kinase 1 alpha 1.
   
 0.999
CTNNBIP1
Beta-catenin-interacting protein 1 (inhibitor of beta-catenin and Tcf-4).
    
 0.999
TCF7
Transcription factor 7 isoform X1.
    
 0.998
LOC110076338
B-cadherin-like.
   
 0.998
CDH1
Cadherin 1.
   
 0.998
BTRC
F-box/WD repeat-containing protein 1A isoform X1.
    
 0.998
TCF7L2
Transcription factor 7-like 2 isoform X1.
    
 0.997
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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