STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB41Ras-related protein Rab-6A-like isoform X1. (261 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
   
 0.848
ARL1
ADP-ribosylation factor-like protein 1 isoform X1.
   
 0.828
COG6
Conserved oligomeric Golgi complex subunit 6.
   
 0.801
RGP1
RAB6A-GEF complex partner protein 2.
    
 0.801
VPS52
VPS52 subunit of GARP complex.
    
 0.793
ARFRP1
ADP-ribosylation factor related protein 1.
    
 0.791
GDI2
Rab GDP dissociation inhibitor beta isoform X1.
   
 0.780
GDI1
Rab GDP dissociation inhibitor alpha.
   
 0.780
ENSPVIP00000014724
annotation not available
    
 0.765
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
    
 0.759
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.