TBX22 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TBX22

T-box transcription factor TBX22 isoform X1. (497 aa)

Predicted Functional Partners:

CLPP

0.679

CLPX

0.612

MEOX2

0.608

RGS9BP

0.598

CLPS

0.594

CLPB

0.557

PTN

0.476

SHOX2

0.417

BARX1

0.413

ABCG5

0.400

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCG5	TBX22	ENSPVIP00000017862	ENSPVIP00000009171	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	T-box transcription factor TBX22 isoform X1.	0.400
BARX1	TBX22	ENSPVIP00000030483	ENSPVIP00000009171	Homeobox protein BarH-like 1.	T-box transcription factor TBX22 isoform X1.	0.413
CLPB	CLPP	ENSPVIP00000028076	ENSPVIP00000011629	ATP-dependent Clp protease ATP-binding subunit ClpB.	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	0.992
CLPB	CLPX	ENSPVIP00000028076	ENSPVIP00000006192	ATP-dependent Clp protease ATP-binding subunit ClpB.	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.	0.752
CLPB	TBX22	ENSPVIP00000028076	ENSPVIP00000009171	ATP-dependent Clp protease ATP-binding subunit ClpB.	T-box transcription factor TBX22 isoform X1.	0.557
CLPP	CLPB	ENSPVIP00000011629	ENSPVIP00000028076	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.992
CLPP	CLPX	ENSPVIP00000011629	ENSPVIP00000006192	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.	0.999
CLPP	TBX22	ENSPVIP00000011629	ENSPVIP00000009171	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	T-box transcription factor TBX22 isoform X1.	0.679
CLPS	TBX22	ENSPVIP00000012759	ENSPVIP00000009171	Colipase.	T-box transcription factor TBX22 isoform X1.	0.594
CLPX	CLPB	ENSPVIP00000006192	ENSPVIP00000028076	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.752
CLPX	CLPP	ENSPVIP00000006192	ENSPVIP00000011629	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	0.999
CLPX	TBX22	ENSPVIP00000006192	ENSPVIP00000009171	ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1.	T-box transcription factor TBX22 isoform X1.	0.612
MEOX2	TBX22	ENSPVIP00000021762	ENSPVIP00000009171	Homeobox protein MOX-2.	T-box transcription factor TBX22 isoform X1.	0.608
PTN	TBX22	ENSPVIP00000029761	ENSPVIP00000009171	Pleiotrophin.	T-box transcription factor TBX22 isoform X1.	0.476
RGS9BP	TBX22	ENSPVIP00000019739	ENSPVIP00000009171	Regulator of G protein signaling 9 binding protein.	T-box transcription factor TBX22 isoform X1.	0.598
SHOX2	TBX22	ENSPVIP00000027526	ENSPVIP00000009171	Short stature homeobox protein 2.	T-box transcription factor TBX22 isoform X1.	0.417
TBX22	ABCG5	ENSPVIP00000009171	ENSPVIP00000017862	T-box transcription factor TBX22 isoform X1.	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	0.400
TBX22	BARX1	ENSPVIP00000009171	ENSPVIP00000030483	T-box transcription factor TBX22 isoform X1.	Homeobox protein BarH-like 1.	0.413
TBX22	CLPB	ENSPVIP00000009171	ENSPVIP00000028076	T-box transcription factor TBX22 isoform X1.	ATP-dependent Clp protease ATP-binding subunit ClpB.	0.557
TBX22	CLPP	ENSPVIP00000009171	ENSPVIP00000011629	T-box transcription factor TBX22 isoform X1.	ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1.	0.679