STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086647Charged multivesicular body protein 1b-2-like. (184 aa)    
Predicted Functional Partners:
CHMP2B
Charged multivesicular body protein 2B.
   
 0.985
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog.
   
 0.976
VPS4A
Vacuolar protein sorting-associated protein 4A.
   
 0.974
VPS4B
Vacuolar protein sorting-associated protein 4B.
   
 0.974
CHMP2A
Charged multivesicular body protein 2A.
   
 0.973
CHMP4B
Charged multivesicular body protein 4b.
   
 0.969
CHMP7
Charged multivesicular body protein 7.
    
 0.953
CHMP4A
Charged multivesicular body protein 4a.
   
 0.951
CHMP1A
Charged multivesicular body protein 1a.
  
  
 
0.902
MLKL
Mixed lineage kinase domain-like protein.
     
  0.900
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.