STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086643DNA excision repair protein ERCC-6-like. (1292 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK1.
   
 0.981
RMI1
RecQ-mediated genome instability protein 1.
    
 
 0.933
TOP3A
DNA topoisomerase 3-alpha.
  
 
 0.913
BLM
Bloom syndrome protein-like.
  
 
 0.905
EXO1
Exonuclease 1 isoform X1.
   
 0.810
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.794
KIF18A
Kinesin family member 18/19.
   
 
 0.792
SGO1
Shugoshin-like 1.
   
 0.777
BUB1
Mitotic checkpoint serine/threonine-protein kinase BUB1.
   
 0.773
ENSPVIP00000020409
annotation not available
   
 0.753
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.