STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086643DNA excision repair protein ERCC-6-like. (1292 aa)    
Predicted Functional Partners:
PLK1
Serine/threonine-protein kinase PLK1.
   
 0.908
LEO1
RNA polymerase-associated protein LEO1.
   
 0.844
EXO1
Exonuclease 1 isoform X1.
   
 0.792
PCNA
Proliferating cell nuclear antigen isoform X1.
  
 0.784
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.759
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.751
RAD18
RAD18 E3 ubiquitin protein ligase.
   
 0.749
DMAP1
DNA methyltransferase 1-associated protein 1 isoform X1.
    
 0.731
CENPI
Centromere protein I.
   
 0.727
RUVBL2
RuvB-like protein 2.
   
 0.708
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.