STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SS18L1Calcium-responsive transactivator isoform X1. (402 aa)    
Predicted Functional Partners:
SS18
LOW QUALITY PROTEIN: protein SSXT.
     
 
0.900
BCL7A
B-cell CLL/lymphoma 7 protein family member A.
   
 0.883
BRD9
Bromodomain containing 9.
   
 0.881
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 0.880
BCL7C
B-cell CLL/lymphoma 7 protein family member C.
   
 0.876
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E, member 1.
   
 0.858
PHF10
PHD finger protein 10 isoform X1.
    
 0.827
SMARCD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D.
    
 0.814
SMARCA2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4.
   
 0.791
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4.
   
 0.791
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.