Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000009180Syntaxin 1B/2/3. (307 aa)    
Predicted Functional Partners:
VAMP4
Vesicle-associated membrane protein 4.
    
 0.952
SNAP23
Synaptosomal-associated protein 23.
   
 0.920
VAMP1
Vesicle-associated membrane protein 1 isoform X1.
    
 0.799
VAMP3
LOW QUALITY PROTEIN: vesicle-associated membrane protein 3.
    
 0.799
LOC110078709
Vesicle-associated membrane protein 2-like.
    
 0.799
VAMP7
Vesicle-associated membrane protein 7 isoform X1.
    
 0.779
YKT6
Synaptobrevin homolog YKT6.
    
 0.670
NSF
Vesicle-fusing ATPase isoform X1.
   
 0.652
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.644
GOSR2
Golgi SNAP receptor complex member 2 isoform X1.
    
 0.633
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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