Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086884Cadherin-4-like. (179 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
   
 0.844
LOC110088017
Cadherin-4.
 
      0.829
JUP
Junction plakoglobin isoform X1.
   
 0.811
PTPN1
Protein tyrosine phosphatase non-receptor type 1.
    
 0.731
ARVCF
Armadillo repeat protein deleted in velo-cardio-facial syndrome.
    
 0.667
CTNND1
Catenin (cadherin-associated protein), delta 1.
    
 0.667
LOC110089335
Cadherin 8, type 2.
 
 
  0.647
CDH13
Cadherin 13, H-cadherin.
 
 
 
  0.617
PTPN2
Tyrosine-protein phosphatase non-receptor type 2 isoform X1.
    
 0.608
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.581
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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