STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRABP1Cellular retinoic acid-binding protein 1. (137 aa)    
Predicted Functional Partners:
TTR
Transthyretin.
   
 
 0.709
IFT80
Intraflagellar transport protein 80 homolog isoform X1.
     
 0.627
KIF3A
Kinesin family member 3A.
      
 0.618
VGF
Neurosecretory protein VGF.
      
 0.617
IFT81
Intraflagellar transport protein 81 homolog.
      
 0.617
BBS4
Bardet-Biedl syndrome 4 protein isoform X1.
    
 0.602
CYP26A1
Cytochrome P450 family 26 subfamily A.
     
 0.596
CYP26B1
Cytochrome P450 family 26 subfamily B.
     
 0.575
CRYM
Thiomorpholine-carboxylate dehydrogenase.
      
 0.574
RAI1
Retinoic acid-induced protein 1 isoform X1.
      
 0.571
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.