STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFC3H1Zinc finger C3H1 domain-containing protein isoform X1. (1978 aa)    
Predicted Functional Partners:
MTREX
Superkiller viralicidic activity 2-like 2.
    
 0.994
C1D
Nuclear nucleic acid-binding protein C1D.
    
 0.982
EXOSC5
Exosome complex component RRP46.
    
 0.981
MPHOSPH6
M-phase phosphoprotein 6, animal type.
    
 0.957
SRRT
Serrate RNA effector molecule homolog isoform X1.
    
 0.927
EXOSC7
Exosome complex component RRP42.
    
 0.920
EXOSC9
Exosome complex component RRP45 isoform X1.
     
 0.915
PAPOLG
Poly(A) polymerase gamma.
   
 0.908
RBM26
RNA-binding protein 26 isoform X1.
   
 0.906
EXOSC3
Exosome complex component RRP40.
     
 0.886
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.