Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLN6Ceroid-lipofuscinosis neuronal protein 6 isoform X1. (301 aa)    
Predicted Functional Partners:
CLN5
Ceroid-lipofuscinosis neuronal protein 5.
  
 
 
 0.932
PPT1
Palmitoyl-protein thioesterase 1.
    
 
 0.906
CLN8
Ceroid-lipofuscinosis neuronal protein 8.
      
 0.904
CLN3
Battenin isoform X1.
   
  
 0.902
MFSD8
MFS transporter, ceroid-lipofuscinosis neuronal protein 7.
      
 0.768
TPP1
Tripeptidyl-peptidase 1.
    
 0.743
CTSF
Cathepsin F.
   
  
 0.635
ARSG
Arylsulfatase G.
      
 0.627
KCTD7
BTB/POZ domain-containing protein KCTD7/14.
    
 
 0.623
ITGB6
Integrin beta 6.
   
 0.596
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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