STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRFAM7ANicotinic acetylcholine receptor alpha-7. (502 aa)    
Predicted Functional Partners:
LYPD6
Ly6/PLAUR domain-containing protein 6.
    
 0.697
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.682
CHRNB3
Neuronal acetylcholine receptor subunit beta-3 isoform X1.
   
  0.623
CHRNA5
Neuronal acetylcholine receptor subunit alpha-5.
   
  0.623
APP
Amyloid beta precursor protein.
    
 
 0.615
CHRNA9
Neuronal acetylcholine receptor subunit alpha-9.
   
  0.566
CHRNA10
Neuronal acetylcholine receptor subunit alpha-10 isoform X1.
   
  0.566
CHRNA1
Nicotinic acetylcholine receptor alpha-1.
   
  0.555
RIC3
Protein RIC-3 isoform X1.
    
 
 0.549
CHRNA6
Neuronal acetylcholine receptor subunit alpha-6.
   
  0.526
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.