Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110085094Intermediate filament protein ON3-like isoform X1. (449 aa)    
Predicted Functional Partners:
LOC110077646
Desmoglein-1-beta-like.
     
  0.800
DSG2
Desmoglein 2.
     
  0.800
LOC110071800
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.712
BAG3
BAG family molecular chaperone regulator 3.
    
 0.701
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 
 0.604
UBE2W
Ubiquitin-conjugating enzyme E2 W isoform X1.
    
 0.569
PSMD4
26S proteasome non-ATPase regulatory subunit 4 isoform X1.
   
 
 0.532
RPS27A
Ribosomal protein S27a.
    
  0.516
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
   
  0.493
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
   
  0.493
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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