STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC49Leucine-rich repeat-containing protein 49. (750 aa)    
Predicted Functional Partners:
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.977
TTLL1
Probable tubulin polyglutamylase TTLL1.
   
 0.975
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.973
NICN1
Nicolin-1.
    
 0.971
KIAA1841
Uncharacterized protein KIAA1841-like.
    
   0.927
ENSPVIP00000018708
annotation not available
    
 
 0.918
C11orf49
UPF0705 protein C11orf49 homolog isoform X1.
    
 
 0.918
TBC1D19
TBC1 domain family member 19.
   
   0.902
ENSPVIP00000001059
annotation not available
    
  0.855
EIF3F
Eukaryotic translation initiation factor 3 subunit F.
    
  0.855
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.