STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000009273annotation not available (185 aa)    
Predicted Functional Partners:
LOC110090460
Interleukin-8-like.
   
 0.781
CXCL12
Stromal cell-derived factor 1.
    
 0.639
CXCR4
C-X-C chemokine receptor type 4.
   
 
0.621
ENSPVIP00000002395
annotation not available
  
 
0.582
LOC110090469
Interleukin-8-like.
   
 
 0.576
CXCR5
C-X-C chemokine receptor type 5 isoform X1.
  
 
0.542
ENSPVIP00000009591
annotation not available
   
 0.502
CXCR6
C-X-C chemokine receptor type 6.
     
0.493
CCR7
C-C chemokine receptor type 7.
   
 
0.492
LOC110084892
C-C chemokine receptor type 5-like.
  
 
0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.