STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110073375Tubulin alpha-8 chain. (449 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform X1.
   
 0.922
TJP1
Tight junction protein ZO-1 isoform X1.
    
 0.905
GJA1
Gap junction alpha-1 protein.
     
  0.900
MARVELD2
MARVEL domain-containing protein 2.
     
  0.900
TUBB3
Tubulin beta-3 chain.
  
0.891
TUBB6
Tubulin beta-6 chain isoform X1.
  
0.888
TUBB4B
Tubulin beta-4B chain.
  
0.888
TUBB1
Tubulin beta-1 chain.
  
0.888
TUBB2A
Tubulin beta-2 chain.
  
0.888
KIF5C
Kinesin family member 5.
    
 0.796
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.