STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB30Ras-related protein Rab-30. (203 aa)    
Predicted Functional Partners:
COG4
Conserved oligomeric Golgi complex subunit 4.
    
 0.899
AVL9
Late secretory pathway protein AVL9 homolog.
      
 0.877
ENSPVIP00000014724
annotation not available
     
 0.830
COG6
Conserved oligomeric Golgi complex subunit 6.
     
 0.821
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
     
 0.818
COG5
Conserved oligomeric Golgi complex subunit 5.
     
 0.808
LOC110070577
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.784
CHM
Rab proteins geranylgeranyltransferase component A 1.
    
 0.784
COG1
Conserved oligomeric Golgi complex subunit 1.
     
 0.775
COG7
Conserved oligomeric Golgi complex subunit 7.
     
 0.734
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.