STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB30Ras-related protein Rab-30. (203 aa)    
Predicted Functional Partners:
COG6
Conserved oligomeric Golgi complex subunit 6.
     
 0.791
ENSPVIP00000014724
annotation not available
     
 0.776
COG4
Conserved oligomeric Golgi complex subunit 4.
    
 0.749
SMIM7
Small integral membrane protein 7.
    
 0.743
COG3
Conserved oligomeric Golgi complex subunit 3.
    
 0.716
COG1
Conserved oligomeric Golgi complex subunit 1.
     
 0.713
COG2
Conserved oligomeric Golgi complex subunit 2 isoform X1.
     
 0.708
COG5
Conserved oligomeric Golgi complex subunit 5.
     
 0.703
COG7
Conserved oligomeric Golgi complex subunit 7.
     
 0.679
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
  0.666
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.