STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCF11Pre-mRNA cleavage complex 2 protein Pcf11. (1722 aa)    
Predicted Functional Partners:
CLP1
Polyribonucleotide 5'-hydroxyl-kinase Clp1.
   
 0.997
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.994
RBBP6
E3 ubiquitin-protein ligase RBBP6.
   
 0.993
CPSF3
Cleavage and polyadenylation specificity factor subunit 3 isoform X1.
   
 0.993
SYMPK
Symplekin.
    
 0.991
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
    
 0.990
CPSF7
Cleavage and polyadenylation specificity factor subunit 6/7.
    
 0.988
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.988
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.988
CPSF6
Cleavage and polyadenylation specificity factor subunit 6 isoform X1.
    
 0.986
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: very high (100%) [HD]