Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MARCHF4E3 ubiquitin-protein ligase MARCH4/9/11. (411 aa)    
Predicted Functional Partners:
TMEM106C
Transmembrane protein 106C isoform X1.
      
 0.693
TM4SF19
Transmembrane 4 L6 family member 19.
      
 0.679
UBE2QL1
Ubiquitin-conjugating enzyme E2Q-like protein 1.
      
 0.677
RRP15
RRP15-like protein.
      
 0.656
GPATCH2
G patch domain-containing protein 2 isoform X1.
      
 0.618
RNF121
RING finger protein 121/175.
      
 0.573
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.571
HERPUD2
HERPUD family member 2.
      
 0.568
SPATA17
Spermatogenesis-associated protein 17 isoform X1.
      
 0.557
UBE2G2
Ubiquitin-conjugating enzyme E2 G2.
    
 
 0.509
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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