STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain-containing protein 42. (473 aa)    
Predicted Functional Partners:
NOB1
RNA-binding protein NOB1.
   
 
 0.602
ACBD3
Golgi resident protein GCP60 isoform X1.
    
 0.599
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.591
PPP1R8
Nuclear inhibitor of protein phosphatase 1 isoform X1.
   
  
 0.589
IQUB
IQ and ubiquitin-like domain-containing protein.
   
  0.576
DNAAF1
Dynein assembly factor 1, axonemal.
   
  0.557
LOC110089286
TRNA selenocysteine 1-associated protein 1-like isoform X1.
    
 0.555
SGTB
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
    
 0.527
RAB30
Ras-related protein Rab-30.
      
 0.518
LEO1
RNA polymerase-associated protein LEO1.
    
 0.500
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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