Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain-containing protein 42. (473 aa)    
Predicted Functional Partners:
NOB1
RNA-binding protein NOB1.
   
 
 0.710
PPP1R8
Nuclear inhibitor of protein phosphatase 1 isoform X1.
   
  
 0.695
LOC110089286
TRNA selenocysteine 1-associated protein 1-like isoform X1.
    
 
 0.663
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
    
 0.635
BOLA1
bolA family member 1.
      
 0.631
ENSPVIP00000009330
annotation not available
      
 0.619
CCDC90B
Coiled-coil domain-containing protein 90B, mitochondrial.
      
 0.619
PCF11
Pre-mRNA cleavage complex 2 protein Pcf11.
    
 
 0.614
GGCT
Gamma-glutamylcyclotransferase isoform X1.
    
 
 0.607
RAB30
Ras-related protein Rab-30.
      
 0.594
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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