Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD1Leiomodin-1 isoform X1. (586 aa)    
Predicted Functional Partners:
LMOD3
Leiomodin 3.
   
 
0.908
LMOD2
Leiomodin-2.
   
 
0.908
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.695
CCDC171
Coiled-coil domain-containing protein 171 isoform X1.
      
 0.695
NUAK1
NUAK family SNF1-like kinase 1.
   
  
 0.670
RBPMS2
RNA binding protein, mRNA processing factor 2.
     
 0.662
CALD1
Caldesmon isoform X1.
   
 0.634
CRTC2
CREB regulated transcription coactivator 2.
      
 0.620
DENND3
DENN domain-containing protein 3 isoform X1.
      
 0.606
MYLPF
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 
 0.601
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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