STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD1Leiomodin-1 isoform X1. (586 aa)    
Predicted Functional Partners:
PFN4
Profilin-4.
      
 0.679
PFN3
Profilin-3.
      
 0.679
CALD1
Caldesmon isoform X1.
    
 0.655
MYL1
Myosin light chain 1/3, skeletal muscle isoform isoform X1.
   
 
 0.623
NEB
Nebulin.
   
 0.585
VCL
Vinculin isoform X1.
   
 
 0.581
LOC110079422
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 
 0.525
MYL9
Myosin regulatory light polypeptide 9.
   
 
 0.525
MYLPF
Myosin regulatory light chain 2, skeletal muscle isoform.
   
 
 0.516
LOC110081888
Myosin heavy chain 9/10/11/14.
   
 
 0.513
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.