STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM183ATransmembrane protein 183A isoform X1. (422 aa)    
Predicted Functional Partners:
NUS1
Dehydrodolichyl diphosphate synthase complex subunit NUS1 isoform X1.
   
  
 0.906
LOC110070317
LOW QUALITY PROTEIN: gamma-tubulin complex component 2-like.
    
 
 0.742
PCMT1
Protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1.
      
 0.694
HSF2BP
Heat shock factor 2-binding protein.
      
 0.693
DAB2
Disabled homolog 2 isoform X1.
     
 0.681
TMEM47
Transmembrane protein 47.
   
  
 0.597
UHRF2
E3 ubiquitin-protein ligase UHRF2 isoform X1.
     
 0.581
UHRF1
E3 ubiquitin-protein ligase UHRF1.
     
 0.581
THOC1
THO complex subunit 1 isoform X1.
      
 0.572
TFEB
Transcription factor EB.
     
 0.572
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.