STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4ASemaphorin-4A. (783 aa)    
Predicted Functional Partners:
PLXND1
Plexin-D1.
    
 0.989
TMEM64
Transmembrane protein 64.
      
 0.695
MMP24
Matrix metalloproteinase-24 (membrane-inserted).
      
 0.620
FAM20A
Pseudokinase FAM20A.
      
 0.583
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
      
 0.571
PLXNB1
Plexin-B1.
    
 0.564
PLXNB2
Plexin-B2.
    
 0.564
PLXNB3
Plexin-B3.
    
 0.564
RND2
Rho-related GTP-binding protein RhoN.
    
 0.561
MET
Hepatocyte growth factor receptor isoform X1.
   
 0.551
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.