STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000009394SCAN domain-containing protein 3-like. (580 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.897
ENSPVIP00000020409
annotation not available
    
 0.836
FANCM
Fanconi anemia group M protein.
    
 0.836
MED14
Mediator of RNA polymerase II transcription subunit 14.
    
 0.708
TONSL
Tonsoku like, DNA repair protein.
    
  0.681
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
 0.648
LOC110078097
WD repeat-containing protein 73-like.
    
 0.648
MED7
Mediator complex subunit 7.
    
 0.612
MED21
Mediator of RNA polymerase II transcription subunit 21.
    
 0.591
MED31
Mediator of RNA polymerase II transcription subunit 31.
    
 0.589
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.