STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF2Transmembrane 9 superfamily member 2/4. (650 aa)    
Predicted Functional Partners:
GLG1
Golgi glycoprotein 1.
   
  
 0.670
A4GALT
Lactosylceramide 4-alpha-galactosyltransferase.
      
 0.631
LOC110069798
Transmembrane emp24 domain-containing protein 10-like.
   
  
 0.619
TMED10
Transmembrane p24 trafficking protein 10.
   
  
 0.619
GALNT2
Polypeptide N-acetylgalactosaminyltransferase 2.
      
 0.586
FAM234B
Protein FAM234B isoform X1.
      
 0.570
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
      
 0.562
TM9SF3
Transmembrane 9 superfamily member 3.
   
  
 0.521
SPTLC1
Serine palmitoyltransferase 1.
   
  
 0.488
SPTSSA
Serine palmitoyltransferase small subunit A.
      
 0.479
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.