Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYOGMyogenic factor 4 (myogenin). (252 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
   
 
 0.853
MYMK
Protein myomaker.
   
  
 0.850
MYOD1
Myoblast determination protein 1.
   
 0.843
MEF2D
LOW QUALITY PROTEIN: myocyte-specific enhancer factor 2D.
    
 0.794
FBXO32
F-box only protein 32 isoform X1.
    
 
 0.725
MEF2A
Myocyte-specific enhancer factor 2A isoform X1.
    
 0.722
MEF2C
Myocyte enhancer factor 2C.
    
 0.722
CACNG1
Voltage-dependent calcium channel gamma-1 subunit.
   
  
 0.700
ENSPVIP00000007234
annotation not available
    
 0.698
TCF4
Transcription factor 4 isoform X1.
    
 0.698
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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