Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX6Sorting nexin-5/6/32. (406 aa)    
Predicted Functional Partners:
ENSPVIP00000011528
annotation not available
  
  
 
0.902
SNX1
Sorting nexin-1/2.
   
 0.853
SNX2
Sorting nexin-2 isoform X1.
   
 0.841
GAK
Cyclin-G-associated kinase isoform X1.
     
  0.699
SNX4
Sorting nexin-4.
   
 0.662
VPS35
Vacuolar protein sorting-associated protein 35.
   
 
 0.660
SNX27
Sorting nexin-27.
    
 
 0.640
SNX8
Sorting nexin-8 isoform X1.
   
 0.622
VPS26B
Vacuolar protein sorting-associated protein 26B.
   
 
 0.606
IGF2R
Insulin like growth factor 2 receptor.
    
 0.603
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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