STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLYBLCitrate lyase subunit beta-like protein, mitochondrial. (348 aa)    
Predicted Functional Partners:
RNF8
E3 ubiquitin-protein ligase RNF8 isoform X1.
   
   0.786
GLRX3
Glutaredoxin-3.
    
 0.643
HSPA9
Stress-70 protein, mitochondrial.
  
 0.639
SLC8B1
Solute carrier family 8 member B1.
     
 0.624
KANSL1
KAT8 regulatory NSL complex subunit 1 isoform X1.
    
 
 0.609
IARS2
Isoleucine--tRNA ligase, mitochondrial.
   
 
 0.582
LYN
Tyrosine-protein kinase Lyn isoform X1.
    
  0.578
PYROXD2
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2.
      
 0.563
ENSPVIP00000006312
annotation not available
   
 0.546
NME8
Thioredoxin domain-containing protein 3.
   
 0.546
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.