STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCCApropionyl-CoA carboxylase subunit alpha. (729 aa)    
Predicted Functional Partners:
MCCC2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial isoform X1.
 
 0.963
PC
Pyruvate carboxylase, mitochondrial.
 
0.961
PCCB
Propionyl-CoA carboxylase beta chain, mitochondrial isoform X1.
 
 0.961
NELFB
Negative elongation factor B isoform X1.
   
 0.893
HLCS
Biotin--protein ligase isoform X1.
    
 0.811
SUPT5H
Transcription elongation factor SPT5.
    
 0.794
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.778
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.771
IVD
Isovaleryl-CoA dehydrogenase, mitochondrial isoform X1.
  
 0.756
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial.
 
  
 0.754
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.