Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GNL1Guanine nucleotide-binding protein-like 1 isoform X1. (626 aa)    
Predicted Functional Partners:
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
   
 
 0.909
NMD3
Nonsense-mediated mRNA decay protein 3.
   
 
 0.896
SDAD1
Protein SDA1 homolog.
   
 
 0.890
RPF2
Ribosome production factor 2 homolog isoform X1.
   
 
 0.849
PA2G4
Proliferation-associated protein 2G4.
   
 
 0.841
PES1
Pescadillo homolog.
   
 0.819
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.815
RRP1B
Ribosomal RNA processing protein 1 homolog B.
   
 
 0.808
FTSJ3
LOW QUALITY PROTEIN: pre-rRNA processing protein FTSJ3.
   
 
 0.803
EBNA1BP2
Probable rRNA-processing protein EBP2.
   
 0.803
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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