STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XYLT2Protein xylosyltransferase. (841 aa)    
Predicted Functional Partners:
B4GALT7
Beta-1,4-galactosyltransferase 7 isoform X1.
     
 0.954
XYLT1
Protein xylosyltransferase.
  
  
 
0.901
SDC1
Syndecan 1.
    
 0.754
FAM20B
Glycosaminoglycan xylosylkinase isoform X1.
      
 0.614
UXS1
UDP-glucuronic acid decarboxylase 1 isoform X1.
   
  
 0.580
CANT1
Soluble calcium-activated nucleotidase 1 isoform X1.
      
 0.550
SDC2
Syndecan-2 isoform X1.
    
 0.540
POMK
Glycoprotein-mannosyl O6-kinase.
    
   0.536
NELFA
Negative elongation factor complex member A.
    
 
 0.534
B3GALT6
Galactosylxylosylprotein 3-beta-galactosyltransferase.
    
 
 0.521
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.