STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000009481annotation not available (573 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.888
LOC110071080
Sushi, nidogen and EGF-like domain-containing protein 1.
 
  
 0.760
RANBP2
RanBP2-like and GRIP domain-containing protein 4 isoform X1.
   
 
  0.561
RPS28
Small subunit ribosomal protein S28e.
   
  0.542
RPS19
Small subunit ribosomal protein S19e.
   
 0.537
RPS15
Small subunit ribosomal protein S15e.
   
  0.534
RPS11
Small subunit ribosomal protein S11e.
   
 0.525
GLE1
GLE1 RNA export mediator.
    
 0.496
RPS4X
Small subunit ribosomal protein S4e.
   
  0.489
RPS7
40S ribosomal protein S7 isoform X1.
   
  0.486
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.