STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMK1LIM domain kinase 1 isoform X1. (685 aa)    
Predicted Functional Partners:
CFL1
Cofilin-1.
   
 0.990
CFL2
Cofilin-2.
   
 0.984
PAK2
Serine/threonine-protein kinase PAK 2.
    
0.964
PAK3
Serine/threonine-protein kinase PAK 3.
    
0.962
PAK1
Serine/threonine-protein kinase PAK 1 isoform X1.
    
0.962
ROCK1
Rho-associated protein kinase 1 isoform X1.
    
0.950
ROCK2
Rho-associated protein kinase 2.
    
0.949
PAK5
P21 (RAC1) activated kinase 5.
    
0.938
PAK6
Serine/threonine-protein kinase PAK 6.
    
0.938
PAK4
Serine/threonine-protein kinase PAK 4 isoform X1.
    
0.938
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.